usda-vision/management-dashboard-web-app/supabase/migrations_backup/20250101000001_complete_schema.sql

-- Complete Database Schema for USDA Vision Pecan Experiments System
-- This migration creates the entire database schema from scratch

-- Enable necessary extensions
CREATE EXTENSION IF NOT EXISTS "uuid-ossp";

-- =============================================
-- 1. ROLES AND USER MANAGEMENT
-- =============================================

-- Create roles table
CREATE TABLE IF NOT EXISTS public.roles (
    id UUID PRIMARY KEY DEFAULT uuid_generate_v4(),
    name TEXT UNIQUE NOT NULL CHECK (name IN ('admin', 'conductor', 'analyst', 'data recorder')),
    description TEXT NOT NULL,
    created_at TIMESTAMP WITH TIME ZONE DEFAULT NOW(),
    updated_at TIMESTAMP WITH TIME ZONE DEFAULT NOW()
);

-- Create user_profiles table to extend auth.users
CREATE TABLE IF NOT EXISTS public.user_profiles (
    id UUID PRIMARY KEY REFERENCES auth.users(id) ON DELETE CASCADE,
    email TEXT NOT NULL,
    status TEXT DEFAULT 'active' CHECK (status IN ('active', 'disabled')),
    created_at TIMESTAMP WITH TIME ZONE DEFAULT NOW(),
    updated_at TIMESTAMP WITH TIME ZONE DEFAULT NOW()
);

-- Create user_roles junction table for many-to-many relationship
CREATE TABLE IF NOT EXISTS public.user_roles (
    id UUID PRIMARY KEY DEFAULT uuid_generate_v4(),
    user_id UUID NOT NULL REFERENCES public.user_profiles(id) ON DELETE CASCADE,
    role_id UUID NOT NULL REFERENCES public.roles(id) ON DELETE CASCADE,
    assigned_at TIMESTAMP WITH TIME ZONE DEFAULT NOW(),
    assigned_by UUID REFERENCES public.user_profiles(id),
    UNIQUE(user_id, role_id)
);

-- =============================================
-- 2. EXPERIMENT PHASES
-- =============================================

-- Create experiment_phases table
CREATE TABLE IF NOT EXISTS public.experiment_phases (
    id UUID PRIMARY KEY DEFAULT uuid_generate_v4(),
    name TEXT NOT NULL UNIQUE,
    description TEXT,
    created_at TIMESTAMP WITH TIME ZONE DEFAULT NOW(),
    updated_at TIMESTAMP WITH TIME ZONE DEFAULT NOW(),
    created_by UUID NOT NULL REFERENCES public.user_profiles(id)
);

-- =============================================
-- 3. EXPERIMENTS
-- =============================================

-- Create experiments table
CREATE TABLE IF NOT EXISTS public.experiments (
    id UUID PRIMARY KEY DEFAULT uuid_generate_v4(),
    experiment_number INTEGER UNIQUE NOT NULL,
    reps_required INTEGER NOT NULL CHECK (reps_required > 0),
    soaking_duration_hr FLOAT NOT NULL CHECK (soaking_duration_hr >= 0),
    air_drying_time_min INTEGER NOT NULL CHECK (air_drying_time_min >= 0),
    plate_contact_frequency_hz FLOAT NOT NULL CHECK (plate_contact_frequency_hz > 0),
    throughput_rate_pecans_sec FLOAT NOT NULL CHECK (throughput_rate_pecans_sec > 0),
    crush_amount_in FLOAT NOT NULL CHECK (crush_amount_in >= 0),
    entry_exit_height_diff_in FLOAT NOT NULL,
    results_status TEXT NOT NULL DEFAULT 'valid' CHECK (results_status IN ('valid', 'invalid')),
    completion_status BOOLEAN NOT NULL DEFAULT false,
    phase_id UUID REFERENCES public.experiment_phases(id) ON DELETE SET NULL,
    created_at TIMESTAMP WITH TIME ZONE DEFAULT NOW(),
    updated_at TIMESTAMP WITH TIME ZONE DEFAULT NOW(),
    created_by UUID NOT NULL REFERENCES public.user_profiles(id)
);

-- =============================================
-- 4. EXPERIMENT REPETITIONS
-- =============================================

-- Create experiment_repetitions table
CREATE TABLE IF NOT EXISTS public.experiment_repetitions (
    id UUID PRIMARY KEY DEFAULT uuid_generate_v4(),
    experiment_id UUID NOT NULL REFERENCES public.experiments(id) ON DELETE CASCADE,
    repetition_number INTEGER NOT NULL CHECK (repetition_number > 0),
    scheduled_date TIMESTAMP WITH TIME ZONE,
    schedule_status TEXT NOT NULL DEFAULT 'pending schedule' 
        CHECK (schedule_status IN ('pending schedule', 'scheduled', 'canceled', 'aborted')),
    completion_status BOOLEAN NOT NULL DEFAULT false,
    is_locked BOOLEAN NOT NULL DEFAULT false,
    locked_at TIMESTAMP WITH TIME ZONE,
    locked_by UUID REFERENCES public.user_profiles(id),
    created_at TIMESTAMP WITH TIME ZONE DEFAULT NOW(),
    updated_at TIMESTAMP WITH TIME ZONE DEFAULT NOW(),
    created_by UUID NOT NULL REFERENCES public.user_profiles(id),
    
    -- Ensure unique repetition numbers per experiment
    CONSTRAINT unique_repetition_per_experiment UNIQUE (experiment_id, repetition_number)
);

-- =============================================
-- 5. DATA ENTRY SYSTEM
-- =============================================

-- Create experiment_phase_drafts table for phase-specific draft management
CREATE TABLE IF NOT EXISTS public.experiment_phase_drafts (
    id UUID PRIMARY KEY DEFAULT uuid_generate_v4(),
    experiment_id UUID NOT NULL REFERENCES public.experiments(id) ON DELETE CASCADE,
    repetition_id UUID NOT NULL REFERENCES public.experiment_repetitions(id) ON DELETE CASCADE,
    user_id UUID NOT NULL REFERENCES public.user_profiles(id),
    phase_name TEXT NOT NULL CHECK (phase_name IN ('pre-soaking', 'air-drying', 'cracking', 'shelling')),
    status TEXT NOT NULL DEFAULT 'draft' CHECK (status IN ('draft', 'submitted', 'withdrawn')),
    draft_name TEXT,
    created_at TIMESTAMP WITH TIME ZONE DEFAULT NOW(),
    updated_at TIMESTAMP WITH TIME ZONE DEFAULT NOW(),
    submitted_at TIMESTAMP WITH TIME ZONE,
    withdrawn_at TIMESTAMP WITH TIME ZONE
);

-- Create experiment_phase_data table for phase-specific measurements
CREATE TABLE IF NOT EXISTS public.experiment_phase_data (
    id UUID PRIMARY KEY DEFAULT uuid_generate_v4(),
    phase_draft_id UUID NOT NULL REFERENCES public.experiment_phase_drafts(id) ON DELETE CASCADE,
    phase_name TEXT NOT NULL CHECK (phase_name IN ('pre-soaking', 'air-drying', 'cracking', 'shelling')),
    
    -- Pre-soaking phase data
    batch_initial_weight_lbs FLOAT CHECK (batch_initial_weight_lbs >= 0),
    initial_shell_moisture_pct FLOAT CHECK (initial_shell_moisture_pct >= 0 AND initial_shell_moisture_pct <= 100),
    initial_kernel_moisture_pct FLOAT CHECK (initial_kernel_moisture_pct >= 0 AND initial_kernel_moisture_pct <= 100),
    soaking_start_time TIMESTAMP WITH TIME ZONE,
    
    -- Air-drying phase data
    airdrying_start_time TIMESTAMP WITH TIME ZONE,
    post_soak_weight_lbs FLOAT CHECK (post_soak_weight_lbs >= 0),
    post_soak_kernel_moisture_pct FLOAT CHECK (post_soak_kernel_moisture_pct >= 0 AND post_soak_kernel_moisture_pct <= 100),
    post_soak_shell_moisture_pct FLOAT CHECK (post_soak_shell_moisture_pct >= 0 AND post_soak_shell_moisture_pct <= 100),
    avg_pecan_diameter_in FLOAT CHECK (avg_pecan_diameter_in >= 0),
    
    -- Cracking phase data
    cracking_start_time TIMESTAMP WITH TIME ZONE,
    
    -- Shelling phase data
    shelling_start_time TIMESTAMP WITH TIME ZONE,
    bin_1_weight_lbs FLOAT CHECK (bin_1_weight_lbs >= 0),
    bin_2_weight_lbs FLOAT CHECK (bin_2_weight_lbs >= 0),
    bin_3_weight_lbs FLOAT CHECK (bin_3_weight_lbs >= 0),
    discharge_bin_weight_lbs FLOAT CHECK (discharge_bin_weight_lbs >= 0),
    bin_1_full_yield_oz FLOAT CHECK (bin_1_full_yield_oz >= 0),
    bin_2_full_yield_oz FLOAT CHECK (bin_2_full_yield_oz >= 0),
    bin_3_full_yield_oz FLOAT CHECK (bin_3_full_yield_oz >= 0),
    bin_1_half_yield_oz FLOAT CHECK (bin_1_half_yield_oz >= 0),
    bin_2_half_yield_oz FLOAT CHECK (bin_2_half_yield_oz >= 0),
    bin_3_half_yield_oz FLOAT CHECK (bin_3_half_yield_oz >= 0),
    
    created_at TIMESTAMP WITH TIME ZONE DEFAULT NOW(),
    updated_at TIMESTAMP WITH TIME ZONE DEFAULT NOW(),
    
    -- Constraint: One record per phase draft
    CONSTRAINT unique_phase_per_draft UNIQUE (phase_draft_id, phase_name)
);

-- Create pecan_diameter_measurements table for individual diameter measurements
CREATE TABLE IF NOT EXISTS public.pecan_diameter_measurements (
    id UUID PRIMARY KEY DEFAULT uuid_generate_v4(),
    phase_data_id UUID NOT NULL REFERENCES public.experiment_phase_data(id) ON DELETE CASCADE,
    measurement_number INTEGER NOT NULL CHECK (measurement_number >= 1 AND measurement_number <= 10),
    diameter_in FLOAT NOT NULL CHECK (diameter_in >= 0),
    created_at TIMESTAMP WITH TIME ZONE DEFAULT NOW(),
    
    -- Constraint: Unique measurement number per phase data
    CONSTRAINT unique_measurement_per_phase UNIQUE (phase_data_id, measurement_number)
);

-- =============================================
-- 6. INDEXES FOR PERFORMANCE
-- =============================================

-- User management indexes
CREATE INDEX IF NOT EXISTS idx_user_profiles_email ON public.user_profiles(email);
CREATE INDEX IF NOT EXISTS idx_user_profiles_status ON public.user_profiles(status);
CREATE INDEX IF NOT EXISTS idx_user_roles_user_id ON public.user_roles(user_id);
CREATE INDEX IF NOT EXISTS idx_user_roles_role_id ON public.user_roles(role_id);

-- Experiment phases indexes
CREATE INDEX IF NOT EXISTS idx_experiment_phases_name ON public.experiment_phases(name);
CREATE INDEX IF NOT EXISTS idx_experiment_phases_created_by ON public.experiment_phases(created_by);

-- Experiments indexes
CREATE INDEX IF NOT EXISTS idx_experiments_experiment_number ON public.experiments(experiment_number);
CREATE INDEX IF NOT EXISTS idx_experiments_created_by ON public.experiments(created_by);
CREATE INDEX IF NOT EXISTS idx_experiments_results_status ON public.experiments(results_status);
CREATE INDEX IF NOT EXISTS idx_experiments_completion_status ON public.experiments(completion_status);
CREATE INDEX IF NOT EXISTS idx_experiments_created_at ON public.experiments(created_at);
CREATE INDEX IF NOT EXISTS idx_experiments_phase_id ON public.experiments(phase_id);

-- Experiment repetitions indexes
CREATE INDEX IF NOT EXISTS idx_experiment_repetitions_experiment_id ON public.experiment_repetitions(experiment_id);
CREATE INDEX IF NOT EXISTS idx_experiment_repetitions_schedule_status ON public.experiment_repetitions(schedule_status);
CREATE INDEX IF NOT EXISTS idx_experiment_repetitions_completion_status ON public.experiment_repetitions(completion_status);
CREATE INDEX IF NOT EXISTS idx_experiment_repetitions_scheduled_date ON public.experiment_repetitions(scheduled_date);
CREATE INDEX IF NOT EXISTS idx_experiment_repetitions_created_by ON public.experiment_repetitions(created_by);
CREATE INDEX IF NOT EXISTS idx_experiment_repetitions_created_at ON public.experiment_repetitions(created_at);
CREATE INDEX IF NOT EXISTS idx_experiment_repetitions_is_locked ON public.experiment_repetitions(is_locked);

-- Data entry system indexes
CREATE INDEX IF NOT EXISTS idx_experiment_phase_drafts_experiment_id ON public.experiment_phase_drafts(experiment_id);
CREATE INDEX IF NOT EXISTS idx_experiment_phase_drafts_repetition_id ON public.experiment_phase_drafts(repetition_id);
CREATE INDEX IF NOT EXISTS idx_experiment_phase_drafts_user_id ON public.experiment_phase_drafts(user_id);
CREATE INDEX IF NOT EXISTS idx_experiment_phase_drafts_phase_name ON public.experiment_phase_drafts(phase_name);
CREATE INDEX IF NOT EXISTS idx_experiment_phase_drafts_status ON public.experiment_phase_drafts(status);

CREATE INDEX IF NOT EXISTS idx_experiment_phase_data_draft_id ON public.experiment_phase_data(phase_draft_id);
CREATE INDEX IF NOT EXISTS idx_experiment_phase_data_phase_name ON public.experiment_phase_data(phase_name);

CREATE INDEX IF NOT EXISTS idx_pecan_diameter_measurements_phase_data_id ON public.pecan_diameter_measurements(phase_data_id);

-- =============================================
-- 7. TRIGGERS AND FUNCTIONS
-- =============================================

-- Create updated_at trigger function
CREATE OR REPLACE FUNCTION public.handle_updated_at()
RETURNS TRIGGER AS $$
BEGIN
    NEW.updated_at = NOW();
    RETURN NEW;
END;
$$ LANGUAGE plpgsql;

-- Create triggers for updated_at
CREATE TRIGGER set_updated_at_roles
    BEFORE UPDATE ON public.roles
    FOR EACH ROW
    EXECUTE FUNCTION public.handle_updated_at();

CREATE TRIGGER set_updated_at_user_profiles
    BEFORE UPDATE ON public.user_profiles
    FOR EACH ROW
    EXECUTE FUNCTION public.handle_updated_at();

CREATE TRIGGER set_updated_at_experiment_phases
    BEFORE UPDATE ON public.experiment_phases
    FOR EACH ROW
    EXECUTE FUNCTION public.handle_updated_at();

CREATE TRIGGER set_updated_at_experiments
    BEFORE UPDATE ON public.experiments
    FOR EACH ROW
    EXECUTE FUNCTION public.handle_updated_at();

CREATE TRIGGER set_updated_at_experiment_repetitions
    BEFORE UPDATE ON public.experiment_repetitions
    FOR EACH ROW
    EXECUTE FUNCTION public.handle_updated_at();

CREATE TRIGGER set_updated_at_experiment_phase_drafts
    BEFORE UPDATE ON public.experiment_phase_drafts
    FOR EACH ROW
    EXECUTE FUNCTION public.handle_updated_at();

CREATE TRIGGER set_updated_at_experiment_phase_data
    BEFORE UPDATE ON public.experiment_phase_data
    FOR EACH ROW
    EXECUTE FUNCTION public.handle_updated_at();

-- Function to validate repetition number doesn't exceed experiment's reps_required
CREATE OR REPLACE FUNCTION validate_repetition_number()
RETURNS TRIGGER AS $$
DECLARE
    max_reps INTEGER;
BEGIN
    -- Get the reps_required for this experiment
    SELECT reps_required INTO max_reps
    FROM public.experiments
    WHERE id = NEW.experiment_id;

    -- Check if repetition number exceeds the limit
    IF NEW.repetition_number > max_reps THEN
        RAISE EXCEPTION 'Repetition number % exceeds maximum allowed repetitions % for experiment',
            NEW.repetition_number, max_reps;
    END IF;

    RETURN NEW;
END;
$$ LANGUAGE plpgsql;

-- Create trigger to validate repetition number
CREATE TRIGGER trigger_validate_repetition_number
    BEFORE INSERT OR UPDATE ON public.experiment_repetitions
    FOR EACH ROW
    EXECUTE FUNCTION validate_repetition_number();

-- Function to handle phase draft status changes
CREATE OR REPLACE FUNCTION public.handle_phase_draft_status_change()
RETURNS TRIGGER AS $$
BEGIN
    -- Set submitted_at when status changes to 'submitted'
    IF NEW.status = 'submitted' AND OLD.status != 'submitted' THEN
        NEW.submitted_at = NOW();
        NEW.withdrawn_at = NULL;
    END IF;

    -- Set withdrawn_at when status changes to 'withdrawn'
    IF NEW.status = 'withdrawn' AND OLD.status = 'submitted' THEN
        NEW.withdrawn_at = NOW();
    END IF;

    -- Clear timestamps when status changes back to 'draft'
    IF NEW.status = 'draft' AND OLD.status IN ('submitted', 'withdrawn') THEN
        NEW.submitted_at = NULL;
        NEW.withdrawn_at = NULL;
    END IF;

    RETURN NEW;
END;
$$ LANGUAGE plpgsql;

CREATE TRIGGER set_timestamps_experiment_phase_drafts
    BEFORE UPDATE ON public.experiment_phase_drafts
    FOR EACH ROW
    EXECUTE FUNCTION public.handle_phase_draft_status_change();

-- =============================================
-- 8. HELPER FUNCTIONS
-- =============================================

-- Helper function to get current user's roles
CREATE OR REPLACE FUNCTION public.get_user_roles()
RETURNS TEXT[] AS $$
BEGIN
    RETURN ARRAY(
        SELECT r.name
        FROM public.user_roles ur
        JOIN public.roles r ON ur.role_id = r.id
        WHERE ur.user_id = auth.uid()
    );
END;
$$ LANGUAGE plpgsql SECURITY DEFINER;

-- Helper function to get current user's first role (for backward compatibility)
CREATE OR REPLACE FUNCTION public.get_user_role()
RETURNS TEXT AS $$
BEGIN
    -- Return the first role found (for backward compatibility)
    RETURN (
        SELECT r.name
        FROM public.user_roles ur
        JOIN public.roles r ON ur.role_id = r.id
        WHERE ur.user_id = auth.uid()
        LIMIT 1
    );
END;
$$ LANGUAGE plpgsql SECURITY DEFINER;

-- Helper function to check if user is admin
CREATE OR REPLACE FUNCTION public.is_admin()
RETURNS BOOLEAN AS $$
BEGIN
    RETURN 'admin' = ANY(public.get_user_roles());
END;
$$ LANGUAGE plpgsql SECURITY DEFINER;

-- Helper function to check if user has specific role
CREATE OR REPLACE FUNCTION public.has_role(role_name TEXT)
RETURNS BOOLEAN AS $$
BEGIN
    RETURN role_name = ANY(public.get_user_roles());
END;
$$ LANGUAGE plpgsql SECURITY DEFINER;

-- Helper function to check if user can manage experiments
CREATE OR REPLACE FUNCTION public.can_manage_experiments()
RETURNS BOOLEAN AS $$
BEGIN
    RETURN EXISTS (
        SELECT 1
        FROM public.user_roles ur
        JOIN public.roles r ON ur.role_id = r.id
        WHERE ur.user_id = auth.uid()
        AND r.name IN ('admin', 'conductor')
    );
END;
$$ LANGUAGE plpgsql SECURITY DEFINER;

-- Function to generate secure temporary password
CREATE OR REPLACE FUNCTION public.generate_temp_password()
RETURNS TEXT AS $$
DECLARE
    chars TEXT := 'ABCDEFGHJKMNPQRSTUVWXYZabcdefghijkmnpqrstuvwxyz23456789';
    result TEXT := '';
    i INTEGER;
BEGIN
    FOR i IN 1..12 LOOP
        result := result || substr(chars, floor(random() * length(chars) + 1)::integer, 1);
    END LOOP;
    RETURN result;
END;
$$ LANGUAGE plpgsql SECURITY DEFINER;

-- Function to create user with roles (for admin use)
CREATE OR REPLACE FUNCTION public.create_user_with_roles(
    user_email TEXT,
    role_names TEXT[],
    temp_password TEXT DEFAULT NULL
)
RETURNS JSON AS $$
DECLARE
    new_user_id UUID;
    role_record RECORD;
    generated_password TEXT;
    result JSON;
    role_count INTEGER;
BEGIN
    -- Only admins can create users
    IF NOT public.is_admin() THEN
        RAISE EXCEPTION 'Only administrators can create users';
    END IF;
    
    -- Validate that at least one role is provided
    IF array_length(role_names, 1) IS NULL OR array_length(role_names, 1) = 0 THEN
        RAISE EXCEPTION 'At least one role must be assigned to the user';
    END IF;
    
    -- Validate that all provided roles exist
    SELECT COUNT(*) INTO role_count
    FROM public.roles 
    WHERE name = ANY(role_names);
    
    IF role_count != array_length(role_names, 1) THEN
        RAISE EXCEPTION 'One or more specified roles do not exist';
    END IF;
    
    -- Check if user already exists
    IF EXISTS (SELECT 1 FROM auth.users WHERE email = user_email) THEN
        RAISE EXCEPTION 'User with email % already exists', user_email;
    END IF;
    
    -- Generate password if not provided
    IF temp_password IS NULL THEN
        generated_password := public.generate_temp_password();
    ELSE
        generated_password := temp_password;
    END IF;
    
    -- Generate new user ID
    new_user_id := uuid_generate_v4();
    
    -- Insert into auth.users (simulating user creation)
    INSERT INTO auth.users (
        instance_id,
        id,
        aud,
        role,
        email,
        encrypted_password,
        email_confirmed_at,
        created_at,
        updated_at,
        confirmation_token,
        email_change,
        email_change_token_new,
        recovery_token
    ) VALUES (
        '00000000-0000-0000-0000-000000000000',
        new_user_id,
        'authenticated',
        'authenticated',
        user_email,
        crypt(generated_password, gen_salt('bf')),
        NOW(),
        NOW(),
        NOW(),
        '',
        '',
        '',
        ''
    );
    
    -- Insert user profile
    INSERT INTO public.user_profiles (id, email, status)
    VALUES (new_user_id, user_email, 'active');
    
    -- Assign roles through the user_roles junction table
    FOR role_record IN 
        SELECT id FROM public.roles WHERE name = ANY(role_names)
    LOOP
        INSERT INTO public.user_roles (user_id, role_id, assigned_by)
        VALUES (new_user_id, role_record.id, auth.uid());
    END LOOP;
    
    -- Return result
    result := json_build_object(
        'user_id', new_user_id,
        'email', user_email,
        'temp_password', generated_password,
        'roles', role_names,
        'status', 'active'
    );
    
    RETURN result;
    
EXCEPTION
    WHEN OTHERS THEN
        -- Clean up any partial inserts
        DELETE FROM public.user_roles WHERE user_id = new_user_id;
        DELETE FROM public.user_profiles WHERE id = new_user_id;
        DELETE FROM auth.users WHERE id = new_user_id;
        RAISE;
END;
$$ LANGUAGE plpgsql SECURITY DEFINER;

-- =============================================
-- 9. ROW LEVEL SECURITY (RLS)
-- =============================================

-- Enable RLS on all tables
ALTER TABLE public.roles ENABLE ROW LEVEL SECURITY;
ALTER TABLE public.user_profiles ENABLE ROW LEVEL SECURITY;
ALTER TABLE public.user_roles ENABLE ROW LEVEL SECURITY;
ALTER TABLE public.experiment_phases ENABLE ROW LEVEL SECURITY;
ALTER TABLE public.experiments ENABLE ROW LEVEL SECURITY;
ALTER TABLE public.experiment_repetitions ENABLE ROW LEVEL SECURITY;
ALTER TABLE public.experiment_phase_drafts ENABLE ROW LEVEL SECURITY;
ALTER TABLE public.experiment_phase_data ENABLE ROW LEVEL SECURITY;
ALTER TABLE public.pecan_diameter_measurements ENABLE ROW LEVEL SECURITY;

-- Roles table policies
CREATE POLICY "Anyone can read roles" ON public.roles
    FOR SELECT USING (true);

CREATE POLICY "Only admins can insert roles" ON public.roles
    FOR INSERT WITH CHECK (public.is_admin());

CREATE POLICY "Only admins can update roles" ON public.roles
    FOR UPDATE USING (public.is_admin());

CREATE POLICY "Only admins can delete roles" ON public.roles
    FOR DELETE USING (public.is_admin());

-- User profiles policies
CREATE POLICY "Users can read own profile, admins can read all" ON public.user_profiles
    FOR SELECT USING (
        auth.uid() = id OR public.is_admin()
    );

CREATE POLICY "Only admins can insert user profiles" ON public.user_profiles
    FOR INSERT WITH CHECK (public.is_admin());

CREATE POLICY "Users can update own profile, admins can update any" ON public.user_profiles
    FOR UPDATE USING (
        auth.uid() = id OR public.is_admin()
    );

CREATE POLICY "Only admins can delete user profiles" ON public.user_profiles
    FOR DELETE USING (public.is_admin());

-- User roles policies
CREATE POLICY "Users can read own roles, admins can read all" ON public.user_roles
    FOR SELECT USING (
        user_id = auth.uid() OR public.is_admin()
    );

CREATE POLICY "Only admins can assign roles" ON public.user_roles
    FOR INSERT WITH CHECK (public.is_admin());

CREATE POLICY "Only admins can update role assignments" ON public.user_roles
    FOR UPDATE USING (public.is_admin());

CREATE POLICY "Only admins can remove role assignments" ON public.user_roles
    FOR DELETE USING (public.is_admin());

-- Experiment phases policies
CREATE POLICY "experiment_phases_select_policy" ON public.experiment_phases
    FOR SELECT
    TO authenticated
    USING (true);

CREATE POLICY "experiment_phases_insert_policy" ON public.experiment_phases
    FOR INSERT
    TO authenticated
    WITH CHECK (public.can_manage_experiments());

CREATE POLICY "experiment_phases_update_policy" ON public.experiment_phases
    FOR UPDATE
    TO authenticated
    USING (public.can_manage_experiments())
    WITH CHECK (public.can_manage_experiments());

CREATE POLICY "experiment_phases_delete_policy" ON public.experiment_phases
    FOR DELETE
    TO authenticated
    USING (public.is_admin());

-- Experiments policies
CREATE POLICY "experiments_select_policy" ON public.experiments
    FOR SELECT
    TO authenticated
    USING (true);

CREATE POLICY "experiments_insert_policy" ON public.experiments
    FOR INSERT
    TO authenticated
    WITH CHECK (public.can_manage_experiments());

CREATE POLICY "experiments_update_policy" ON public.experiments
    FOR UPDATE
    TO authenticated
    USING (public.can_manage_experiments())
    WITH CHECK (public.can_manage_experiments());

CREATE POLICY "experiments_delete_policy" ON public.experiments
    FOR DELETE
    TO authenticated
    USING (public.is_admin());

-- Experiment repetitions policies
CREATE POLICY "Users can view experiment repetitions" ON public.experiment_repetitions
    FOR SELECT
    TO authenticated
    USING (true);

CREATE POLICY "Users can create experiment repetitions" ON public.experiment_repetitions
    FOR INSERT WITH CHECK (
        experiment_id IN (
            SELECT id FROM public.experiments
            WHERE created_by = auth.uid()
        )
        OR public.is_admin()
    );

CREATE POLICY "Users can update experiment repetitions" ON public.experiment_repetitions
    FOR UPDATE USING (
        experiment_id IN (
            SELECT id FROM public.experiments
            WHERE created_by = auth.uid()
        )
        OR public.is_admin()
    );

CREATE POLICY "Users can delete experiment repetitions" ON public.experiment_repetitions
    FOR DELETE USING (
        experiment_id IN (
            SELECT id FROM public.experiments
            WHERE created_by = auth.uid()
        )
        OR public.is_admin()
    );

-- Experiment phase drafts policies
CREATE POLICY "experiment_phase_drafts_select_policy" ON public.experiment_phase_drafts
    FOR SELECT
    TO authenticated
    USING (true);

CREATE POLICY "experiment_phase_drafts_insert_policy" ON public.experiment_phase_drafts
    FOR INSERT
    TO authenticated
    WITH CHECK (user_id = auth.uid());

CREATE POLICY "experiment_phase_drafts_update_policy" ON public.experiment_phase_drafts
    FOR UPDATE
    TO authenticated
    USING (
        (user_id = auth.uid() AND NOT EXISTS (
            SELECT 1 FROM public.experiment_repetitions
            WHERE id = repetition_id AND is_locked = true
        )) OR public.is_admin()
    )
    WITH CHECK (
        (user_id = auth.uid() AND NOT EXISTS (
            SELECT 1 FROM public.experiment_repetitions
            WHERE id = repetition_id AND is_locked = true
        )) OR public.is_admin()
    );

CREATE POLICY "experiment_phase_drafts_delete_policy" ON public.experiment_phase_drafts
    FOR DELETE
    TO authenticated
    USING (
        (user_id = auth.uid() AND status = 'draft' AND NOT EXISTS (
            SELECT 1 FROM public.experiment_repetitions
            WHERE id = repetition_id AND is_locked = true
        )) OR public.is_admin()
    );

-- Experiment phase data policies
CREATE POLICY "experiment_phase_data_select_policy" ON public.experiment_phase_data
    FOR SELECT
    TO authenticated
    USING (true);

CREATE POLICY "experiment_phase_data_insert_policy" ON public.experiment_phase_data
    FOR INSERT
    TO authenticated
    WITH CHECK (
        EXISTS (
            SELECT 1 FROM public.experiment_phase_drafts epd
            WHERE epd.id = phase_draft_id AND epd.user_id = auth.uid()
        )
    );

CREATE POLICY "experiment_phase_data_update_policy" ON public.experiment_phase_data
    FOR UPDATE
    TO authenticated
    USING (
        EXISTS (
            SELECT 1 FROM public.experiment_phase_drafts epd
            WHERE epd.id = phase_draft_id AND epd.user_id = auth.uid()
        )
    )
    WITH CHECK (
        EXISTS (
            SELECT 1 FROM public.experiment_phase_drafts epd
            WHERE epd.id = phase_draft_id AND epd.user_id = auth.uid()
        )
    );

CREATE POLICY "experiment_phase_data_delete_policy" ON public.experiment_phase_data
    FOR DELETE
    TO authenticated
    USING (
        EXISTS (
            SELECT 1 FROM public.experiment_phase_drafts epd
            WHERE epd.id = phase_draft_id AND epd.user_id = auth.uid() AND epd.status = 'draft'
        )
    );

-- Pecan diameter measurements policies
CREATE POLICY "pecan_diameter_measurements_select_policy" ON public.pecan_diameter_measurements
    FOR SELECT
    TO authenticated
    USING (true);

CREATE POLICY "pecan_diameter_measurements_insert_policy" ON public.pecan_diameter_measurements
    FOR INSERT
    TO authenticated
    WITH CHECK (
        EXISTS (
            SELECT 1 FROM public.experiment_phase_data epd
            JOIN public.experiment_phase_drafts epdr ON epd.phase_draft_id = epdr.id
            WHERE epd.id = phase_data_id AND epdr.user_id = auth.uid()
        )
    );

CREATE POLICY "pecan_diameter_measurements_update_policy" ON public.pecan_diameter_measurements
    FOR UPDATE
    TO authenticated
    USING (
        EXISTS (
            SELECT 1 FROM public.experiment_phase_data epd
            JOIN public.experiment_phase_drafts epdr ON epd.phase_draft_id = epdr.id
            WHERE epd.id = phase_data_id AND epdr.user_id = auth.uid()
        )
    )
    WITH CHECK (
        EXISTS (
            SELECT 1 FROM public.experiment_phase_data epd
            JOIN public.experiment_phase_drafts epdr ON epd.phase_draft_id = epdr.id
            WHERE epd.id = phase_data_id AND epdr.user_id = auth.uid()
        )
    );

CREATE POLICY "pecan_diameter_measurements_delete_policy" ON public.pecan_diameter_measurements
    FOR DELETE
    TO authenticated
    USING (
        EXISTS (
            SELECT 1 FROM public.experiment_phase_data epd
            JOIN public.experiment_phase_drafts epdr ON epd.phase_draft_id = epdr.id
            WHERE epd.id = phase_data_id AND epdr.user_id = auth.uid() AND epdr.status = 'draft'
        )
    );

-- =============================================
-- 10. COMMENTS FOR DOCUMENTATION
-- =============================================

COMMENT ON TABLE public.roles IS 'System roles for user access control';
COMMENT ON TABLE public.user_profiles IS 'Extended user profiles linked to auth.users';
COMMENT ON TABLE public.user_roles IS 'Many-to-many relationship between users and roles';
COMMENT ON TABLE public.experiment_phases IS 'Groups experiments into logical phases for better organization and navigation';
COMMENT ON TABLE public.experiments IS 'Stores experiment definitions for pecan processing with parameters and status tracking';
COMMENT ON TABLE public.experiment_repetitions IS 'Individual repetitions of experiment blueprints that can be scheduled and executed';
COMMENT ON TABLE public.experiment_phase_drafts IS 'Phase-specific draft records for experiment data entry with status tracking';
COMMENT ON TABLE public.experiment_phase_data IS 'Phase-specific measurement data for experiments';
COMMENT ON TABLE public.pecan_diameter_measurements IS 'Individual pecan diameter measurements (up to 10 per phase)';